Function reference • VBphenoR

All functions

logit_CAVI(): Variational inference for Bayesian logistic regression using CAVI algorithm

run_Model(): Run the Variational Bayes patient phenotyping model

scd_cohort: Synthetic Sickle Cell Anaemia data

vb_gmm_cavi(): Main algorithm function for the VB CAVI GMM

VB_GMM_ELBO(): Calculate the Evidence Lower Bound (ELBO)

VB_GMM_Expectation(): Variational Bayes Expectation step

VB_GMM_Init(): Initialise the variational parameters and the hyper parameters

VB_GMM_Maximisation(): Variational Bayes Maximisation step